San Diego - Clearance
This is an official Port of Entry.
See the main Noonsite/USA/Formalities page for full details of clearance.
Since international security has been beefed-up, it is important that the rules relating to clearance are strictly adhered to. Going into Mexican waters, even for a day, entails reporting your arrival on return. The U.S.-Mexico border is clearly marked as a dotted line on all navigation charts. Two white boundary monuments on shoreline up as range markers, and at night, the border is marked by a white flashing light (fl 4, 5s) from a tower that stands 157 feet high. Just south of the monuments is the Tijuana bullring, a round structure more easily visible on a hazy day than the monuments.
San Diego is the first port of entry into the U.S. for coastal boats coming up from Mexico. Yachts coming in from Hawaii can lay a direct course for Los Angeles/Long Beach, but a yacht coming up from Mexico that does not clear Customs at San Diego must remain outside the three-mile limit.
There are 2 reporting stations in the San Diego area; Shelter Island and Dana Launch Ramp Public Dock, Mission Bay.
For Shelter Island, go alongside the gated San Diego Harbour Police dock on the south end of the island in San Diego Bay. Do not go to the larger municipal guest docks to the north. Only the skipper may go through the gate and only for the purpose of contacting U.S. Customs and Border Authorities. There is a payphone near the gate or at the Harbour Police and moorings building. Phone star (*)82 and request to be cleared into the U.S. Alternatively dial 1 619 685 4300, option #4 from another phone.
If the Harbour Police dock is occupied, you may pick up one of the yellow quarantine mooring buoys just across the channel.
The Mission Bay reporting station is at the Dana Launch Ramp Public Dock at Dana Landing Road, Mission Bay. This station can only be used by vessels of less than 50 ft and with under 42 ft air draft as this clearance is needed to pass under the Ventura Bridge (at LW). On arrival call 1 619 685 4300, Option #4.
During heightened alerts, U.S. Coast Guard patrols routinely stop to question or board vessels entering San Diego and Mission bays. Boarding by the Coast Guard does not fulfill the requirement to report your arrival and clear customs at the Harbour Police dock.
NOTE: There was a recent report from a cruiser (foreign-flagged vessel) that had a difficult experience attempting to find anchorage in the midst of a cruising rally. See this report for that anecdote.
Last updated: January 2018
The U.S. Customs and Border Protection Website
CBP Reporting Station (Dana Launch Ramp Public Dock)
CBP Reporting Station (Shelter Island)
Harbor Police Communications Center
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Related to following destinations: San Diego, USA, West Coast (USA)
Port Navigation
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San Diego
October 2021
San Diego has many rules on anchoring. This was our experience in some of the anchorages:
Glorietta Bay – A5 anchorage
Quite a small anchorage but has easy access to the dinghy dock just across the water. Anchor dug in right away . We took the dinghy from here to Shelter Island and it took around 50 mins.
LaPlaya – A1 anchorage ( weekend only)
Very close to shelter Island and you can leave your dinghy on Pearson’s fuel dock. We also left our dinghy on San Diego Yacht Club’s dinghy dock, not sure if we were supposed to be nobody said anything and at this time we didn’t know we could leave it at the fuel dock.
Long Term anchorage for non San Diego residents -A9
It can get quite tight here but boats seemed to come and go, we only stayed for one night.
We used the dinghy dock to the far side of the CoastGuard Station. It was very full and everyone had their outboards, fuel tanks and dinghy’s locked on. We walked to the airport from here to clear out, as a foreign flagged vessel you need to get your 1300 form stamped by CBP. As of writing it is situated in terminal 2 , go to the sign that says Zone V on the side of the road and it’s directly inside the building on the ground floor, opens 9-5 Monday to Friday. If you wish to clear out at the weekend then you’d need to go on the Friday. Telephone number for assistance is : (619) 491-2601 ( NB : this is not the office number but they will assist you. )
San Diego – Public Dock
You can book in advance by checking availability online and then calling : (619) 686-6227 or email them your boat registration document and driving licence . They will then allocate you a berth. Very helpful if you can get them on the phone, they did respond quickly to our emails too.
The toilets are public toilets and are open 24/7 , they also replenish the stock every day .
The showers were not open, although we were provided the key code!
The rumours we’d heard about this dock were :
“There are many homeless people hanging around who will steal things from your boat during the night.
There are many derelict boats here.
Very noisy at night as homeless people come up and down the dock”
Our experience was very positive, there are many local transient yachts that come in for a few days to do work on their boats. There are no derelict boats, some people just don’t have enough money to do their boats up. There were no homeless people on the shore or the docks, some locals came on the docks to look at the boats. There is a Pilot Boat that went out about twice a night but after the first few nights we became used to the noise of the engine.
Laundry in town – Mayla’s Fluff & Fold Service $2 a lb , blankets, quilts etc separate, drop off before 10am get back the same day. She’s only there in the mornings. Good, friendly service. Tel : +1 (619) 829-4219 . This is a coin laundry so you can do it yourself. There is a toilet for customers.
Downwind Marine chandlery was a great shop and they were extremely helpful by allowing us to have things delivered here. Their riggers ( Ed and Evan) were also very knowledgeable and did some splicing of new ropes for us.
We used Steve Harrison – Harrison Marine, on Shelter Drive to do some machine work, he’s a sailor, knows his stuff and gets the job done on time!
We used the electric scooters to get around but the buses are better if you want to go a bit further. Then uber/ Lyft , definitely try both as the prices vary at different times .